Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-2P42586 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.92□□□□□ -0.66
Nkx2-2P42586 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Gm23949-201ENSMUST00000104027 127 ntBASIC10.92□□□□□ -0.66
Nkx2-2P42586 Mir877-201ENSMUST00000104738 85 ntBASIC10.92□□□□□ -0.66
Nkx2-2P42586 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Gm11700-201ENSMUST00000119409 403 ntBASIC10.92□□□□□ -0.66
Nkx2-2P42586 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Gm28071-201ENSMUST00000190355 478 ntBASIC10.92□□□□□ -0.66
Nkx2-2P42586 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Gm7003-201ENSMUST00000195089 312 ntBASIC10.92□□□□□ -0.66
Nkx2-2P42586 Gm38314-201ENSMUST00000195709 625 ntBASIC10.92□□□□□ -0.66
Nkx2-2P42586 Gm18038-201ENSMUST00000197900 485 ntBASIC10.92□□□□□ -0.66
Nkx2-2P42586 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.92□□□□□ -0.66
Nkx2-2P42586 Gm9797-202ENSMUST00000218003 294 ntBASIC10.92□□□□□ -0.66
Nkx2-2P42586 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.92□□□□□ -0.66
Nkx2-2P42586 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nkx2-2P42586 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkx2-2P42586 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.92□□□□□ -0.66
Nkx2-2P42586 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.91□□□□□ -0.66
Nkx2-2P42586 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.91□□□□□ -0.66
Nkx2-2P42586 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Gm11509-201ENSMUST00000117358 325 ntBASIC10.91□□□□□ -0.66
Nkx2-2P42586 Gm12380-201ENSMUST00000119012 544 ntBASIC10.91□□□□□ -0.66
Nkx2-2P42586 Gm11960-201ENSMUST00000122068 925 ntBASIC10.91□□□□□ -0.66
Nkx2-2P42586 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Mir7677-201ENSMUST00000184226 67 ntBASIC10.91□□□□□ -0.66
Nkx2-2P42586 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Gm26448-201ENSMUST00000082446 203 ntBASIC10.91□□□□□ -0.66
Nkx2-2P42586 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-2P42586 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms