Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Gm15163-201ENSMUST00000120749 1302 ntBASIC8.03□□□□□ -1.12
Rpl28P41105 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Rpl28P41105 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl28P41105 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Rpl28P41105 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
Rpl28P41105 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Rpl28P41105 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.12
Rpl28P41105 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Rpl28P41105 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Rpl28P41105 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Rpl28P41105 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 AC154314.2-201ENSMUST00000223677 3502 ntBASIC8.02□□□□□ -1.13
Rpl28P41105 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Gm21136-201ENSMUST00000186812 2575 ntBASIC8.02□□□□□ -1.13
Rpl28P41105 Gm6605-201ENSMUST00000031488 2574 ntBASIC8.02□□□□□ -1.13
Rpl28P41105 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Rpl28P41105 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Rpl28P41105 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
Rpl28P41105 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Rpl28P41105 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC8.02□□□□□ -1.13
Rpl28P41105 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC8.02□□□□□ -1.13
Rpl28P41105 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC8.02□□□□□ -1.13
Rpl28P41105 Gm2639-201ENSMUST00000156881 1297 ntBASIC8.02□□□□□ -1.13
Rpl28P41105 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC8.02□□□□□ -1.13
Rpl28P41105 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC8.02□□□□□ -1.13
Rpl28P41105 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Gm4034-201ENSMUST00000187674 480 ntBASIC8.02□□□□□ -1.13
Rpl28P41105 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC8.02□□□□□ -1.13
Rpl28P41105 Gm9299-201ENSMUST00000206392 1140 ntBASIC8.02□□□□□ -1.13
Rpl28P41105 Gm5904-201ENSMUST00000210286 865 ntBASIC8.02□□□□□ -1.13
Rpl28P41105 Gm7561-201ENSMUST00000211203 886 ntBASIC8.02□□□□□ -1.13
Rpl28P41105 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.13
Rpl28P41105 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Gm24526-201ENSMUST00000082921 158 ntBASIC8.02□□□□□ -1.13
Rpl28P41105 Gm10268-201ENSMUST00000085340 555 ntBASIC8.02□□□□□ -1.13
Rpl28P41105 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Rpl28P41105 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Rpl28P41105 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Rpl28P41105 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Rpl28P41105 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
Rpl28P41105 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 AC125374.1-201ENSMUST00000213573 1400 ntBASIC8.02□□□□□ -1.13
Rpl28P41105 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Rpl28P41105 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 AC159195.3-201ENSMUST00000225162 2211 ntBASIC8.02□□□□□ -1.13
Rpl28P41105 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl28P41105 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Rpl28P41105 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rpl28P41105 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rpl28P41105 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rpl28P41105 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rpl28P41105 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rpl28P41105 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rpl28P41105 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC8.01□□□□□ -1.13
Rpl28P41105 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Rpl28P41105 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rpl28P41105 Gm43931-201ENSMUST00000204817 2870 ntBASIC8.01□□□□□ -1.13
Rpl28P41105 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rpl28P41105 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rpl28P41105 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rpl28P41105 AC138329.2-201ENSMUST00000225579 1842 ntBASIC8.01□□□□□ -1.13
Rpl28P41105 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rpl28P41105 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Rpl28P41105 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rpl28P41105 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rpl28P41105 Gm12846-201ENSMUST00000120431 1373 ntBASIC8.01□□□□□ -1.13
Rpl28P41105 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms