Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Chd1P40201 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Chd1P40201 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Chd1P40201 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Chd1P40201 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC17.49■□□□□ 0.39
Chd1P40201 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC17.49■□□□□ 0.39
Chd1P40201 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Chd1P40201 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC17.49■□□□□ 0.39
Chd1P40201 Gm19918-201ENSMUST00000194858 400 ntBASIC17.49■□□□□ 0.39
Chd1P40201 Gm9409-201ENSMUST00000197017 316 ntBASIC17.49■□□□□ 0.39
Chd1P40201 Gm5738-201ENSMUST00000206016 779 ntBASIC17.49■□□□□ 0.39
Chd1P40201 Gm8268-201ENSMUST00000209683 458 ntBASIC17.49■□□□□ 0.39
Chd1P40201 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 AC102523.1-201ENSMUST00000228706 1144 ntBASIC17.49■□□□□ 0.39
Chd1P40201 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Gm17541-201ENSMUST00000080062 525 ntBASIC17.49■□□□□ 0.39
Chd1P40201 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd1P40201 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Chd1P40201 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Chd1P40201 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC17.49■□□□□ 0.39
Chd1P40201 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Gm8522-201ENSMUST00000118416 1929 ntBASIC17.48■□□□□ 0.39
Chd1P40201 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Gm12947-201ENSMUST00000116114 420 ntBASIC17.48■□□□□ 0.39
Chd1P40201 Gm19246-201ENSMUST00000173599 255 ntBASIC17.48■□□□□ 0.39
Chd1P40201 Gm18555-201ENSMUST00000197935 584 ntBASIC17.48■□□□□ 0.39
Chd1P40201 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Lect2-202ENSMUST00000225183 823 ntBASIC17.48■□□□□ 0.39
Chd1P40201 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC17.48■□□□□ 0.39
Chd1P40201 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC17.48■□□□□ 0.39
Chd1P40201 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd1P40201 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Chd1P40201 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Chd1P40201 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Chd1P40201 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC17.47■□□□□ 0.39
Chd1P40201 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC17.47■□□□□ 0.39
Chd1P40201 AC140314.1-201ENSMUST00000219549 554 ntBASIC17.47■□□□□ 0.39
Chd1P40201 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC17.47■□□□□ 0.39
Chd1P40201 CT025618.1-201ENSMUST00000227409 1279 ntBASIC17.47■□□□□ 0.39
Chd1P40201 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Chd1P40201 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Gm5510-201ENSMUST00000117826 486 ntBASIC17.47■□□□□ 0.39
Chd1P40201 Gm15373-201ENSMUST00000121495 214 ntBASIC17.47■□□□□ 0.39
Chd1P40201 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Chd1P40201 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Gm44640-201ENSMUST00000206894 247 ntBASIC17.47■□□□□ 0.39
Chd1P40201 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chd1P40201 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Chd1P40201 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Chd1P40201 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.46■□□□□ 0.39
Chd1P40201 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd1P40201 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms