Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.27□□□□□ -0.76
Slc6a1P31648 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Slc6a1P31648 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Slc6a1P31648 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Slc6a1P31648 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.27□□□□□ -0.77
Slc6a1P31648 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Slc6a1P31648 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.27□□□□□ -0.77
Slc6a1P31648 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.27□□□□□ -0.77
Slc6a1P31648 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.27□□□□□ -0.77
Slc6a1P31648 Gm22331-201ENSMUST00000158066 136 ntBASIC10.27□□□□□ -0.77
Slc6a1P31648 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.27□□□□□ -0.77
Slc6a1P31648 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.27□□□□□ -0.77
Slc6a1P31648 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Slc6a1P31648 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.27□□□□□ -0.77
Slc6a1P31648 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Slc6a1P31648 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.27□□□□□ -0.77
Slc6a1P31648 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.27□□□□□ -0.77
Slc6a1P31648 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.27□□□□□ -0.77
Slc6a1P31648 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.27□□□□□ -0.77
Slc6a1P31648 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Slc6a1P31648 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.27□□□□□ -0.77
Slc6a1P31648 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Slc6a1P31648 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.26□□□□□ -0.77
Slc6a1P31648 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Slc6a1P31648 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Slc6a1P31648 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.26□□□□□ -0.77
Slc6a1P31648 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
Slc6a1P31648 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.26□□□□□ -0.77
Slc6a1P31648 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.26□□□□□ -0.77
Slc6a1P31648 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.26□□□□□ -0.77
Slc6a1P31648 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Slc6a1P31648 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.26□□□□□ -0.77
Slc6a1P31648 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.26□□□□□ -0.77
Slc6a1P31648 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Slc6a1P31648 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.26□□□□□ -0.77
Slc6a1P31648 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Gm28693-202ENSMUST00000190758 331 ntBASIC10.26□□□□□ -0.77
Slc6a1P31648 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.26□□□□□ -0.77
Slc6a1P31648 Gm43630-201ENSMUST00000201550 776 ntBASIC10.26□□□□□ -0.77
Slc6a1P31648 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.26□□□□□ -0.77
Slc6a1P31648 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Slc6a1P31648 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Slc6a1P31648 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Slc6a1P31648 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Slc6a1P31648 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Slc6a1P31648 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.26□□□□□ -0.77
Slc6a1P31648 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.26□□□□□ -0.77
Slc6a1P31648 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Slc6a1P31648 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.26□□□□□ -0.77
Slc6a1P31648 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.25□□□□□ -0.77
Slc6a1P31648 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.25□□□□□ -0.77
Slc6a1P31648 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Slc6a1P31648 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Slc6a1P31648 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms