Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Vcam1P29533 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.66□□□□□ -0.22
Vcam1P29533 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.66□□□□□ -0.22
Vcam1P29533 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Vcam1P29533 Gm7504-201ENSMUST00000201449 424 ntBASIC13.66□□□□□ -0.22
Vcam1P29533 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.66□□□□□ -0.22
Vcam1P29533 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.66□□□□□ -0.22
Vcam1P29533 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.66□□□□□ -0.22
Vcam1P29533 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Vcam1P29533 Gm4978-201ENSMUST00000071565 801 ntBASIC13.66□□□□□ -0.22
Vcam1P29533 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Vcam1P29533 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.66□□□□□ -0.22
Vcam1P29533 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vcam1P29533 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.65□□□□□ -0.22
Vcam1P29533 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Gm12795-201ENSMUST00000117594 539 ntBASIC13.65□□□□□ -0.22
Vcam1P29533 Gm9089-201ENSMUST00000122027 526 ntBASIC13.65□□□□□ -0.22
Vcam1P29533 Gm11960-201ENSMUST00000122068 925 ntBASIC13.65□□□□□ -0.22
Vcam1P29533 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.65□□□□□ -0.22
Vcam1P29533 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.65□□□□□ -0.22
Vcam1P29533 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Vcam1P29533 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.65□□□□□ -0.22
Vcam1P29533 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.65□□□□□ -0.22
Vcam1P29533 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.65□□□□□ -0.22
Vcam1P29533 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.65□□□□□ -0.22
Vcam1P29533 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vcam1P29533 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.65□□□□□ -0.22
Vcam1P29533 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Vcam1P29533 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.23
Vcam1P29533 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Vcam1P29533 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Vcam1P29533 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.64□□□□□ -0.23
Vcam1P29533 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcam1P29533 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcam1P29533 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcam1P29533 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcam1P29533 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vcam1P29533 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcam1P29533 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vcam1P29533 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Vcam1P29533 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Vcam1P29533 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcam1P29533 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcam1P29533 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vcam1P29533 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Vcam1P29533 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.64□□□□□ -0.23
Vcam1P29533 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcam1P29533 Gm26013-201ENSMUST00000104404 119 ntBASIC13.64□□□□□ -0.23
Vcam1P29533 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.64□□□□□ -0.23
Vcam1P29533 Gm13182-201ENSMUST00000122241 312 ntBASIC13.64□□□□□ -0.23
Vcam1P29533 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.64□□□□□ -0.23
Vcam1P29533 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcam1P29533 Gm8492-201ENSMUST00000182375 987 ntBASIC13.64□□□□□ -0.23
Vcam1P29533 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vcam1P29533 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vcam1P29533 Gm17825-201ENSMUST00000206836 794 ntBASIC13.64□□□□□ -0.23
Vcam1P29533 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.64□□□□□ -0.23
Vcam1P29533 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcam1P29533 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vcam1P29533 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vcam1P29533 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vcam1P29533 Gm23105-201ENSMUST00000083719 134 ntBASIC13.64□□□□□ -0.23
Vcam1P29533 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vcam1P29533 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcam1P29533 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms