Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RxrbP28704 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RxrbP28704 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RxrbP28704 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
RxrbP28704 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RxrbP28704 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
RxrbP28704 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RxrbP28704 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.98□□□□□ -0.49
RxrbP28704 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
RxrbP28704 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RxrbP28704 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RxrbP28704 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RxrbP28704 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RxrbP28704 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RxrbP28704 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.98□□□□□ -0.49
RxrbP28704 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.98□□□□□ -0.49
RxrbP28704 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
RxrbP28704 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RxrbP28704 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.98□□□□□ -0.49
RxrbP28704 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
RxrbP28704 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.98□□□□□ -0.49
RxrbP28704 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RxrbP28704 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.98□□□□□ -0.49
RxrbP28704 Gm12502-201ENSMUST00000120197 444 ntBASIC11.98□□□□□ -0.49
RxrbP28704 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RxrbP28704 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.98□□□□□ -0.49
RxrbP28704 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.98□□□□□ -0.49
RxrbP28704 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.98□□□□□ -0.49
RxrbP28704 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RxrbP28704 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RxrbP28704 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.98□□□□□ -0.49
RxrbP28704 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RxrbP28704 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RxrbP28704 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RxrbP28704 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
RxrbP28704 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RxrbP28704 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.98□□□□□ -0.49
RxrbP28704 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.98□□□□□ -0.49
RxrbP28704 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RxrbP28704 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
RxrbP28704 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
RxrbP28704 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.97□□□□□ -0.49
RxrbP28704 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.97□□□□□ -0.49
RxrbP28704 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
RxrbP28704 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RxrbP28704 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.97□□□□□ -0.49
RxrbP28704 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RxrbP28704 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.97□□□□□ -0.49
RxrbP28704 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
RxrbP28704 Gm4984-201ENSMUST00000115987 360 ntBASIC11.97□□□□□ -0.49
RxrbP28704 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
RxrbP28704 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.97□□□□□ -0.49
RxrbP28704 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RxrbP28704 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Gm38241-201ENSMUST00000192641 898 ntBASIC11.97□□□□□ -0.49
RxrbP28704 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
RxrbP28704 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.97□□□□□ -0.49
RxrbP28704 Gm44405-201ENSMUST00000198952 126 ntBASIC11.97□□□□□ -0.49
RxrbP28704 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.97□□□□□ -0.49
RxrbP28704 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.97□□□□□ -0.49
RxrbP28704 Gm5781-201ENSMUST00000219792 443 ntBASIC11.97□□□□□ -0.49
RxrbP28704 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Snora73a-201ENSMUST00000082453 205 ntBASIC11.97□□□□□ -0.49
RxrbP28704 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.97□□□□□ -0.49
RxrbP28704 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
RxrbP28704 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.97□□□□□ -0.49
RxrbP28704 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
RxrbP28704 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RxrbP28704 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.97□□□□□ -0.49
RxrbP28704 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
RxrbP28704 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.97□□□□□ -0.49
RxrbP28704 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RxrbP28704 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
RxrbP28704 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RxrbP28704 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RxrbP28704 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RxrbP28704 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RxrbP28704 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms