Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Col8a2P25318 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.95□□□□□ -0.82
Col8a2P25318 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Col8a2P25318 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.94□□□□□ -0.82
Col8a2P25318 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.94□□□□□ -0.82
Col8a2P25318 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Col8a2P25318 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC9.94□□□□□ -0.82
Col8a2P25318 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.94□□□□□ -0.82
Col8a2P25318 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Col8a2P25318 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.94□□□□□ -0.82
Col8a2P25318 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Col8a2P25318 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Col8a2P25318 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Mir1943-201ENSMUST00000158276 73 ntBASIC9.94□□□□□ -0.82
Col8a2P25318 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Gm5523-201ENSMUST00000180415 997 ntBASIC9.94□□□□□ -0.82
Col8a2P25318 Mir6546-201ENSMUST00000184460 62 ntBASIC9.94□□□□□ -0.82
Col8a2P25318 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Col8a2P25318 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Col8a2P25318 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.94□□□□□ -0.82
Col8a2P25318 Gm43184-201ENSMUST00000197247 542 ntBASIC9.94□□□□□ -0.82
Col8a2P25318 Gm42997-202ENSMUST00000200321 985 ntBASIC9.94□□□□□ -0.82
Col8a2P25318 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Gm43947-201ENSMUST00000203019 959 ntBASIC9.94□□□□□ -0.82
Col8a2P25318 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Col8a2P25318 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Gm45575-201ENSMUST00000210283 548 ntBASIC9.94□□□□□ -0.82
Col8a2P25318 AC166992.1-201ENSMUST00000216356 565 ntBASIC9.94□□□□□ -0.82
Col8a2P25318 Nsd1-205ENSMUST00000224693 852 ntBASIC9.94□□□□□ -0.82
Col8a2P25318 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.94□□□□□ -0.82
Col8a2P25318 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.94□□□□□ -0.82
Col8a2P25318 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.94□□□□□ -0.82
Col8a2P25318 Erich3-203ENSMUST00000189969 3460 ntBASIC9.94□□□□□ -0.82
Col8a2P25318 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Col8a2P25318 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Col8a2P25318 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
Col8a2P25318 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a2P25318 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.93□□□□□ -0.82
Col8a2P25318 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Col8a2P25318 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a2P25318 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.93□□□□□ -0.82
Col8a2P25318 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms