Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ginm1-202ENSMUST00000065124 300 ntBASIC13.09□□□□□ -0.31
Pde6bP23440 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.09□□□□□ -0.31
Pde6bP23440 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6bP23440 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6bP23440 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Pde6bP23440 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.09□□□□□ -0.31
Pde6bP23440 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.09□□□□□ -0.31
Pde6bP23440 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6bP23440 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Pde6bP23440 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.31
Pde6bP23440 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Pde6bP23440 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.08□□□□□ -0.31
Pde6bP23440 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pde6bP23440 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Pde6bP23440 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6bP23440 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6bP23440 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6bP23440 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6bP23440 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6bP23440 Gm26286-201ENSMUST00000104166 134 ntBASIC13.08□□□□□ -0.32
Pde6bP23440 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.08□□□□□ -0.32
Pde6bP23440 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.08□□□□□ -0.32
Pde6bP23440 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pde6bP23440 Gm43916-201ENSMUST00000205062 967 ntBASIC13.08□□□□□ -0.32
Pde6bP23440 Gm44882-201ENSMUST00000205702 802 ntBASIC13.08□□□□□ -0.32
Pde6bP23440 Gm44545-201ENSMUST00000208262 746 ntBASIC13.08□□□□□ -0.32
Pde6bP23440 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.08□□□□□ -0.32
Pde6bP23440 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pde6bP23440 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6bP23440 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6bP23440 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6bP23440 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6bP23440 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.08□□□□□ -0.32
Pde6bP23440 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6bP23440 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6bP23440 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6bP23440 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Pde6bP23440 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6bP23440 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6bP23440 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6bP23440 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6bP23440 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pde6bP23440 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Pde6bP23440 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.07□□□□□ -0.32
Pde6bP23440 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.07□□□□□ -0.32
Pde6bP23440 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.07□□□□□ -0.32
Pde6bP23440 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Pde6bP23440 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pde6bP23440 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pde6bP23440 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pde6bP23440 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.07□□□□□ -0.32
Pde6bP23440 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pde6bP23440 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Pde6bP23440 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6bP23440 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pde6bP23440 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pde6bP23440 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pde6bP23440 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pde6bP23440 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pde6bP23440 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pde6bP23440 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pde6bP23440 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pde6bP23440 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pde6bP23440 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pde6bP23440 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pde6bP23440 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pde6bP23440 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pde6bP23440 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.06□□□□□ -0.32
Pde6bP23440 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pde6bP23440 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pde6bP23440 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pde6bP23440 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pde6bP23440 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.06□□□□□ -0.32
Pde6bP23440 Gm27438-201ENSMUST00000183480 110 ntBASIC13.06□□□□□ -0.32
Pde6bP23440 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pde6bP23440 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pde6bP23440 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pde6bP23440 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pde6bP23440 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pde6bP23440 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pde6bP23440 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms