Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Gm6158-201ENSMUST00000109467 904 ntBASIC9.12□□□□□ -0.95
Fn1P11276 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC9.12□□□□□ -0.95
Fn1P11276 Gm16209-201ENSMUST00000118457 627 ntBASIC9.12□□□□□ -0.95
Fn1P11276 Gm12009-201ENSMUST00000121361 1100 ntBASIC9.12□□□□□ -0.95
Fn1P11276 Gm10171-201ENSMUST00000126220 628 ntBASIC9.12□□□□□ -0.95
Fn1P11276 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.12□□□□□ -0.95
Fn1P11276 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.12□□□□□ -0.95
Fn1P11276 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC9.12□□□□□ -0.95
Fn1P11276 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Gm10233-201ENSMUST00000089275 628 ntBASIC9.12□□□□□ -0.95
Fn1P11276 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Fn1P11276 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Fn1P11276 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.12□□□□□ -0.95
Fn1P11276 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC9.11□□□□□ -0.95
Fn1P11276 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Gm27149-201ENSMUST00000184716 1266 ntBASIC9.11□□□□□ -0.95
Fn1P11276 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Cog3-203ENSMUST00000227473 4197 ntBASIC9.11□□□□□ -0.95
Fn1P11276 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC9.11□□□□□ -0.95
Fn1P11276 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Fn1P11276 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Fn1P11276 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
Fn1P11276 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Gm25492-201ENSMUST00000157383 129 ntBASIC9.11□□□□□ -0.95
Fn1P11276 Gm25872-201ENSMUST00000177784 100 ntBASIC9.11□□□□□ -0.95
Fn1P11276 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC9.11□□□□□ -0.95
Fn1P11276 Gm7765-201ENSMUST00000182585 974 ntBASIC9.11□□□□□ -0.95
Fn1P11276 Gm38233-201ENSMUST00000194259 807 ntBASIC9.11□□□□□ -0.95
Fn1P11276 Gm6518-201ENSMUST00000208450 342 ntBASIC9.11□□□□□ -0.95
Fn1P11276 Gm18466-201ENSMUST00000209147 499 ntBASIC9.11□□□□□ -0.95
Fn1P11276 Gm5040-201ENSMUST00000218609 800 ntBASIC9.11□□□□□ -0.95
Fn1P11276 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Fn1P11276 AL844586.1-201ENSMUST00000224297 1042 ntBASIC9.11□□□□□ -0.95
Fn1P11276 CT010480.2-201ENSMUST00000225424 737 ntBASIC9.11□□□□□ -0.95
Fn1P11276 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Fn1P11276 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Fn1P11276 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.1□□□□□ -0.95
Fn1P11276 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Fn1P11276 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.1□□□□□ -0.95
Fn1P11276 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Fn1P11276 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Fn1P11276 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Fn1P11276 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Fn1P11276 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Fn1P11276 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Fn1P11276 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
Fn1P11276 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.1□□□□□ -0.95
Fn1P11276 Gm14524-201ENSMUST00000121066 683 ntBASIC9.1□□□□□ -0.95
Fn1P11276 Gm14113-201ENSMUST00000121399 976 ntBASIC9.1□□□□□ -0.95
Fn1P11276 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC9.1□□□□□ -0.95
Fn1P11276 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Fn1P11276 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms