Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.2□□□□□ -0.3
Hoxc6P10629 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Hoxc6P10629 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Hoxc6P10629 Gm9089-201ENSMUST00000122027 526 ntBASIC13.2□□□□□ -0.3
Hoxc6P10629 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.2□□□□□ -0.3
Hoxc6P10629 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.2□□□□□ -0.3
Hoxc6P10629 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Hoxc6P10629 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.2□□□□□ -0.3
Hoxc6P10629 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc6P10629 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.2□□□□□ -0.3
Hoxc6P10629 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Hoxc6P10629 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Hoxc6P10629 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.19□□□□□ -0.3
Hoxc6P10629 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.19□□□□□ -0.3
Hoxc6P10629 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Hoxc6P10629 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm15615-201ENSMUST00000118876 198 ntBASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.19□□□□□ -0.3
Hoxc6P10629 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.19□□□□□ -0.3
Hoxc6P10629 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm28937-201ENSMUST00000185413 695 ntBASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm29400-201ENSMUST00000187208 695 ntBASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm28662-201ENSMUST00000188446 695 ntBASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm28251-201ENSMUST00000188835 695 ntBASIC13.19□□□□□ -0.3
Hoxc6P10629 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm37318-201ENSMUST00000194325 695 ntBASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm38017-201ENSMUST00000194768 695 ntBASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm37287-201ENSMUST00000195449 695 ntBASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm37793-201ENSMUST00000195548 695 ntBASIC13.19□□□□□ -0.3
Hoxc6P10629 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.19□□□□□ -0.3
Hoxc6P10629 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm9111-201ENSMUST00000219394 709 ntBASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.19□□□□□ -0.3
Hoxc6P10629 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Hoxc6P10629 Mir483-201ENSMUST00000093631 73 ntBASIC13.19□□□□□ -0.3
Hoxc6P10629 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Hoxc6P10629 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Hoxc6P10629 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc6P10629 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hoxc6P10629 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Hoxc6P10629 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.18□□□□□ -0.3
Hoxc6P10629 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.18□□□□□ -0.3
Hoxc6P10629 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Hoxc6P10629 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc6P10629 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms