Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UbbP0CG49 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.39□□□□□ -0.75
UbbP0CG49 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.39□□□□□ -0.75
UbbP0CG49 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UbbP0CG49 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
UbbP0CG49 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
UbbP0CG49 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UbbP0CG49 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UbbP0CG49 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UbbP0CG49 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UbbP0CG49 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UbbP0CG49 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UbbP0CG49 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
UbbP0CG49 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UbbP0CG49 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UbbP0CG49 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.39□□□□□ -0.75
UbbP0CG49 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
UbbP0CG49 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
UbbP0CG49 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
UbbP0CG49 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UbbP0CG49 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
UbbP0CG49 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
UbbP0CG49 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
UbbP0CG49 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.38□□□□□ -0.75
UbbP0CG49 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.38□□□□□ -0.75
UbbP0CG49 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.38□□□□□ -0.75
UbbP0CG49 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.38□□□□□ -0.75
UbbP0CG49 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.38□□□□□ -0.75
UbbP0CG49 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.38□□□□□ -0.75
UbbP0CG49 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.38□□□□□ -0.75
UbbP0CG49 Gm16177-201ENSMUST00000120728 718 ntBASIC10.38□□□□□ -0.75
UbbP0CG49 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
UbbP0CG49 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.38□□□□□ -0.75
UbbP0CG49 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
UbbP0CG49 Gm16379-201ENSMUST00000161469 348 ntBASIC10.38□□□□□ -0.75
UbbP0CG49 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.38□□□□□ -0.75
UbbP0CG49 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Gm37201-201ENSMUST00000191845 523 ntBASIC10.38□□□□□ -0.75
UbbP0CG49 Gm8762-201ENSMUST00000193486 339 ntBASIC10.38□□□□□ -0.75
UbbP0CG49 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
UbbP0CG49 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.38□□□□□ -0.75
UbbP0CG49 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.38□□□□□ -0.75
UbbP0CG49 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
UbbP0CG49 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.38□□□□□ -0.75
UbbP0CG49 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
UbbP0CG49 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.38□□□□□ -0.75
UbbP0CG49 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.38□□□□□ -0.75
UbbP0CG49 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UbbP0CG49 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
UbbP0CG49 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.37□□□□□ -0.75
UbbP0CG49 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
UbbP0CG49 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
UbbP0CG49 Gm12058-201ENSMUST00000118614 437 ntBASIC10.37□□□□□ -0.75
UbbP0CG49 Gm11591-201ENSMUST00000120063 702 ntBASIC10.37□□□□□ -0.75
UbbP0CG49 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.37□□□□□ -0.75
UbbP0CG49 Gm14999-201ENSMUST00000121039 624 ntBASIC10.37□□□□□ -0.75
UbbP0CG49 Gm12138-201ENSMUST00000122180 951 ntBASIC10.37□□□□□ -0.75
UbbP0CG49 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.37□□□□□ -0.75
UbbP0CG49 Gm24548-201ENSMUST00000158650 108 ntBASIC10.37□□□□□ -0.75
UbbP0CG49 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UbbP0CG49 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
UbbP0CG49 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
UbbP0CG49 Gm29127-201ENSMUST00000188304 517 ntBASIC10.37□□□□□ -0.75
UbbP0CG49 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms