Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col3a1P08121 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col3a1P08121 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.08□□□□□ -0.16
Col3a1P08121 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.08□□□□□ -0.16
Col3a1P08121 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC14.08□□□□□ -0.16
Col3a1P08121 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC14.08□□□□□ -0.16
Col3a1P08121 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col3a1P08121 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC14.08□□□□□ -0.16
Col3a1P08121 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC14.08□□□□□ -0.16
Col3a1P08121 Gm8197-202ENSMUST00000193422 934 ntBASIC14.08□□□□□ -0.16
Col3a1P08121 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC14.08□□□□□ -0.16
Col3a1P08121 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Col3a1P08121 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.08□□□□□ -0.16
Col3a1P08121 AC154176.1-201ENSMUST00000225897 220 ntBASIC14.08□□□□□ -0.16
Col3a1P08121 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col3a1P08121 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col3a1P08121 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col3a1P08121 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col3a1P08121 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
Col3a1P08121 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col3a1P08121 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col3a1P08121 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col3a1P08121 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col3a1P08121 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Col3a1P08121 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col3a1P08121 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col3a1P08121 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.08□□□□□ -0.16
Col3a1P08121 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col3a1P08121 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col3a1P08121 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col3a1P08121 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col3a1P08121 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col3a1P08121 Gm11700-201ENSMUST00000119409 403 ntBASIC14.07□□□□□ -0.16
Col3a1P08121 Gm15549-201ENSMUST00000121595 622 ntBASIC14.07□□□□□ -0.16
Col3a1P08121 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC14.07□□□□□ -0.16
Col3a1P08121 Gm7741-201ENSMUST00000181445 989 ntBASIC14.07□□□□□ -0.16
Col3a1P08121 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.07□□□□□ -0.16
Col3a1P08121 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 AC166341.2-201ENSMUST00000220571 120 ntBASIC14.07□□□□□ -0.16
Col3a1P08121 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.07□□□□□ -0.16
Col3a1P08121 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Col3a1P08121 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.07□□□□□ -0.16
Col3a1P08121 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.07□□□□□ -0.16
Col3a1P08121 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col3a1P08121 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col3a1P08121 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col3a1P08121 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col3a1P08121 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col3a1P08121 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col3a1P08121 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col3a1P08121 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Col3a1P08121 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Gm14071-201ENSMUST00000117817 509 ntBASIC14.06□□□□□ -0.16
Col3a1P08121 Gm15528-201ENSMUST00000117821 864 ntBASIC14.06□□□□□ -0.16
Col3a1P08121 Gm13182-201ENSMUST00000122241 312 ntBASIC14.06□□□□□ -0.16
Col3a1P08121 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC14.06□□□□□ -0.16
Col3a1P08121 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.06□□□□□ -0.16
Col3a1P08121 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC14.06□□□□□ -0.16
Col3a1P08121 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Gm37028-201ENSMUST00000194276 107 ntBASIC14.06□□□□□ -0.16
Col3a1P08121 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.06□□□□□ -0.16
Col3a1P08121 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Col3a1P08121 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC14.06□□□□□ -0.16
Col3a1P08121 Gm3619-201ENSMUST00000219947 775 ntBASIC14.06□□□□□ -0.16
Col3a1P08121 AC136376.2-201ENSMUST00000228819 490 ntBASIC14.06□□□□□ -0.16
Col3a1P08121 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col3a1P08121 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms