Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P04224 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04224 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P04224 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P04224 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04224 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04224 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04224 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
P04224 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.47□□□□□ -0.73
P04224 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
P04224 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
P04224 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
P04224 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
P04224 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
P04224 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
P04224 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
P04224 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
P04224 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
P04224 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Gm8213-201ENSMUST00000118191 441 ntBASIC10.47□□□□□ -0.73
P04224 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
P04224 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.47□□□□□ -0.73
P04224 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.47□□□□□ -0.73
P04224 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.47□□□□□ -0.73
P04224 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.47□□□□□ -0.73
P04224 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.47□□□□□ -0.73
P04224 Gm37042-201ENSMUST00000193816 581 ntBASIC10.47□□□□□ -0.73
P04224 Gm18018-201ENSMUST00000198273 408 ntBASIC10.47□□□□□ -0.73
P04224 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.47□□□□□ -0.73
P04224 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.47□□□□□ -0.73
P04224 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.47□□□□□ -0.73
P04224 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
P04224 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
P04224 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
P04224 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
P04224 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.47□□□□□ -0.73
P04224 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04224 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
P04224 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
P04224 Gm45191-201ENSMUST00000205846 5439 ntBASIC10.46□□□□□ -0.73
P04224 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
P04224 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
P04224 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.46□□□□□ -0.73
P04224 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.46□□□□□ -0.73
P04224 Gm13369-201ENSMUST00000119442 987 ntBASIC10.46□□□□□ -0.73
P04224 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.46□□□□□ -0.73
P04224 Gm2231-201ENSMUST00000125661 612 ntBASIC10.46□□□□□ -0.73
P04224 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
P04224 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.46□□□□□ -0.73
P04224 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P04224 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.46□□□□□ -0.73
P04224 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.46□□□□□ -0.73
P04224 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.46□□□□□ -0.73
P04224 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.46□□□□□ -0.73
P04224 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms