Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01734 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01734 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.95□□□□□ -0.34
P01734 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01734 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01734 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01734 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01734 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01734 Gm23699-201ENSMUST00000158835 135 ntBASIC12.95□□□□□ -0.34
P01734 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01734 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.95□□□□□ -0.34
P01734 Gm2965-201ENSMUST00000198365 343 ntBASIC12.95□□□□□ -0.34
P01734 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01734 Gm18753-201ENSMUST00000201000 566 ntBASIC12.95□□□□□ -0.34
P01734 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.95□□□□□ -0.34
P01734 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.95□□□□□ -0.34
P01734 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.95□□□□□ -0.34
P01734 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01734 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01734 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01734 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01734 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
P01734 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.95□□□□□ -0.34
P01734 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01734 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01734 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.94□□□□□ -0.34
P01734 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
P01734 Gm7851-201ENSMUST00000117574 323 ntBASIC12.94□□□□□ -0.34
P01734 Gm14441-201ENSMUST00000121960 540 ntBASIC12.94□□□□□ -0.34
P01734 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
P01734 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
P01734 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.94□□□□□ -0.34
P01734 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.94□□□□□ -0.34
P01734 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Gm9555-201ENSMUST00000200908 583 ntBASIC12.94□□□□□ -0.34
P01734 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Gm45575-201ENSMUST00000210283 548 ntBASIC12.94□□□□□ -0.34
P01734 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
P01734 Gm2553-201ENSMUST00000215986 605 ntBASIC12.94□□□□□ -0.34
P01734 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.94□□□□□ -0.34
P01734 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
P01734 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
P01734 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.94□□□□□ -0.34
P01734 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
P01734 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.94□□□□□ -0.34
P01734 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
P01734 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.94□□□□□ -0.34
P01734 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01734 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01734 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
P01734 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P01734 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P01734 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P01734 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01734 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01734 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
P01734 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P01734 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.93□□□□□ -0.34
P01734 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
P01734 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
P01734 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P01734 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01734 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
P01734 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
P01734 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01734 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01734 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.93□□□□□ -0.34
P01734 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01734 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms