Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.28□□□□□ -0.44
CopeO89079 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.28□□□□□ -0.44
CopeO89079 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CopeO89079 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopeO89079 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CopeO89079 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CopeO89079 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
CopeO89079 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.27□□□□□ -0.44
CopeO89079 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CopeO89079 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
CopeO89079 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
CopeO89079 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CopeO89079 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.44
CopeO89079 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.27□□□□□ -0.44
CopeO89079 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CopeO89079 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CopeO89079 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.27□□□□□ -0.45
CopeO89079 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.27□□□□□ -0.45
CopeO89079 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CopeO89079 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CopeO89079 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.27□□□□□ -0.45
CopeO89079 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.27□□□□□ -0.45
CopeO89079 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
CopeO89079 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.27□□□□□ -0.45
CopeO89079 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopeO89079 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CopeO89079 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.26□□□□□ -0.45
CopeO89079 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Gm12390-201ENSMUST00000117897 397 ntBASIC12.26□□□□□ -0.45
CopeO89079 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.26□□□□□ -0.45
CopeO89079 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CopeO89079 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.26□□□□□ -0.45
CopeO89079 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.26□□□□□ -0.45
CopeO89079 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.26□□□□□ -0.45
CopeO89079 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.26□□□□□ -0.45
CopeO89079 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.26□□□□□ -0.45
CopeO89079 Gm9996-201ENSMUST00000070359 913 ntBASIC12.26□□□□□ -0.45
CopeO89079 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.26□□□□□ -0.45
CopeO89079 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CopeO89079 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.25□□□□□ -0.45
CopeO89079 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopeO89079 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CopeO89079 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CopeO89079 Gm14441-201ENSMUST00000121960 540 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms