Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC15.19■□□□□ 0.02
Ubr1O70481 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC15.19■□□□□ 0.02
Ubr1O70481 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ubr1O70481 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC15.18■□□□□ 0.02
Ubr1O70481 Gm5641-201ENSMUST00000091130 1488 ntBASIC15.18■□□□□ 0.02
Ubr1O70481 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Ubr1O70481 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ubr1O70481 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.18■□□□□ 0.02
Ubr1O70481 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Gm4862-201ENSMUST00000170405 438 ntBASIC15.18■□□□□ 0.02
Ubr1O70481 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC15.18■□□□□ 0.02
Ubr1O70481 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
Ubr1O70481 Gm25201-201ENSMUST00000083093 170 ntBASIC15.18■□□□□ 0.02
Ubr1O70481 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ubr1O70481 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ubr1O70481 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ubr1O70481 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.18■□□□□ 0.02
Ubr1O70481 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Ubr1O70481 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.18■□□□□ 0.02
Ubr1O70481 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Ubr1O70481 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ubr1O70481 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Ubr1O70481 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ubr1O70481 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ubr1O70481 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Gm45416-201ENSMUST00000209713 2201 ntBASIC15.17■□□□□ 0.02
Ubr1O70481 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Gm43334-201ENSMUST00000197740 1318 ntBASIC15.17■□□□□ 0.02
Ubr1O70481 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Mir671-201ENSMUST00000102432 98 ntBASIC15.17■□□□□ 0.02
Ubr1O70481 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ubr1O70481 Gm15617-201ENSMUST00000118973 771 ntBASIC15.17■□□□□ 0.02
Ubr1O70481 Gm3828-201ENSMUST00000121817 257 ntBASIC15.17■□□□□ 0.02
Ubr1O70481 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Gm16030-201ENSMUST00000159098 603 ntBASIC15.17■□□□□ 0.02
Ubr1O70481 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC15.17■□□□□ 0.02
Ubr1O70481 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Gm9081-201ENSMUST00000182346 991 ntBASIC15.17■□□□□ 0.02
Ubr1O70481 Gm9135-201ENSMUST00000182963 990 ntBASIC15.17■□□□□ 0.02
Ubr1O70481 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC15.17■□□□□ 0.02
Ubr1O70481 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC15.17■□□□□ 0.02
Ubr1O70481 Gm42433-201ENSMUST00000196806 940 ntBASIC15.17■□□□□ 0.02
Ubr1O70481 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC15.17■□□□□ 0.02
Ubr1O70481 Gm40879-201ENSMUST00000220759 612 ntBASIC15.17■□□□□ 0.02
Ubr1O70481 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Ubr1O70481 Smok4a-201ENSMUST00000074512 1455 ntBASIC15.17■□□□□ 0.02
Ubr1O70481 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Gm44573-201ENSMUST00000191753 2370 ntBASIC15.17■□□□□ 0.02
Ubr1O70481 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC15.17■□□□□ 0.02
Ubr1O70481 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ubr1O70481 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.16■□□□□ 0.02
Ubr1O70481 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Gm11619-201ENSMUST00000117474 237 ntBASIC15.16■□□□□ 0.02
Ubr1O70481 Gm16219-201ENSMUST00000120096 274 ntBASIC15.16■□□□□ 0.02
Ubr1O70481 Gm13445-201ENSMUST00000121664 307 ntBASIC15.16■□□□□ 0.02
Ubr1O70481 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Gm25951-201ENSMUST00000175330 64 ntBASIC15.16■□□□□ 0.02
Ubr1O70481 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ubr1O70481 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ubr1O70481 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ubr1O70481 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 214 ms