Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trdmt1O55055 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trdmt1O55055 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.11□□□□□ -0.31
Trdmt1O55055 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trdmt1O55055 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Trdmt1O55055 Gm15615-201ENSMUST00000118876 198 ntBASIC13.11□□□□□ -0.31
Trdmt1O55055 Gm11244-201ENSMUST00000121243 237 ntBASIC13.11□□□□□ -0.31
Trdmt1O55055 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trdmt1O55055 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.11□□□□□ -0.31
Trdmt1O55055 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.11□□□□□ -0.31
Trdmt1O55055 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trdmt1O55055 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Gm26047-201ENSMUST00000157308 113 ntBASIC13.11□□□□□ -0.31
Trdmt1O55055 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trdmt1O55055 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.11□□□□□ -0.31
Trdmt1O55055 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.11□□□□□ -0.31
Trdmt1O55055 Gm26047-202ENSMUST00000198840 115 ntBASIC13.11□□□□□ -0.31
Trdmt1O55055 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.11□□□□□ -0.31
Trdmt1O55055 Gm44124-201ENSMUST00000204159 472 ntBASIC13.11□□□□□ -0.31
Trdmt1O55055 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.11□□□□□ -0.31
Trdmt1O55055 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.11□□□□□ -0.31
Trdmt1O55055 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trdmt1O55055 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Trdmt1O55055 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trdmt1O55055 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.11□□□□□ -0.31
Trdmt1O55055 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trdmt1O55055 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trdmt1O55055 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trdmt1O55055 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trdmt1O55055 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trdmt1O55055 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdmt1O55055 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdmt1O55055 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdmt1O55055 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdmt1O55055 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdmt1O55055 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdmt1O55055 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trdmt1O55055 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdmt1O55055 Gm25766-201ENSMUST00000104101 131 ntBASIC13.1□□□□□ -0.31
Trdmt1O55055 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Trdmt1O55055 Gm12036-201ENSMUST00000120008 530 ntBASIC13.1□□□□□ -0.31
Trdmt1O55055 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.1□□□□□ -0.31
Trdmt1O55055 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.1□□□□□ -0.31
Trdmt1O55055 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.1□□□□□ -0.31
Trdmt1O55055 Gm23218-201ENSMUST00000158124 276 ntBASIC13.1□□□□□ -0.31
Trdmt1O55055 Gm6114-201ENSMUST00000182472 968 ntBASIC13.1□□□□□ -0.31
Trdmt1O55055 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.1□□□□□ -0.31
Trdmt1O55055 Gm29410-201ENSMUST00000188383 694 ntBASIC13.1□□□□□ -0.31
Trdmt1O55055 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trdmt1O55055 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.1□□□□□ -0.31
Trdmt1O55055 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.1□□□□□ -0.31
Trdmt1O55055 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trdmt1O55055 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.1□□□□□ -0.31
Trdmt1O55055 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdmt1O55055 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trdmt1O55055 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdmt1O55055 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.1□□□□□ -0.31
Trdmt1O55055 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdmt1O55055 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdmt1O55055 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trdmt1O55055 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trdmt1O55055 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdmt1O55055 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trdmt1O55055 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.1□□□□□ -0.31
Trdmt1O55055 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.1□□□□□ -0.31
Trdmt1O55055 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trdmt1O55055 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.1□□□□□ -0.31
Trdmt1O55055 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trdmt1O55055 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trdmt1O55055 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Gm25063-201ENSMUST00000104666 94 ntBASIC13.09□□□□□ -0.31
Trdmt1O55055 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms