Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trove2O08848 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Trove2O08848 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.27□□□□□ -0.45
Trove2O08848 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trove2O08848 Gm15703-201ENSMUST00000120250 880 ntBASIC12.27□□□□□ -0.45
Trove2O08848 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trove2O08848 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.27□□□□□ -0.45
Trove2O08848 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.27□□□□□ -0.45
Trove2O08848 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.27□□□□□ -0.45
Trove2O08848 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.27□□□□□ -0.45
Trove2O08848 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trove2O08848 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trove2O08848 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trove2O08848 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.27□□□□□ -0.45
Trove2O08848 Gm45784-201ENSMUST00000188360 142 ntBASIC12.27□□□□□ -0.45
Trove2O08848 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trove2O08848 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.27□□□□□ -0.45
Trove2O08848 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.27□□□□□ -0.45
Trove2O08848 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trove2O08848 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trove2O08848 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trove2O08848 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trove2O08848 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trove2O08848 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trove2O08848 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trove2O08848 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trove2O08848 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trove2O08848 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trove2O08848 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trove2O08848 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trove2O08848 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.27□□□□□ -0.45
Trove2O08848 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Trove2O08848 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Trove2O08848 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.26□□□□□ -0.45
Trove2O08848 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trove2O08848 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trove2O08848 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trove2O08848 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Gm24231-201ENSMUST00000104315 133 ntBASIC12.26□□□□□ -0.45
Trove2O08848 Gm13829-201ENSMUST00000119600 138 ntBASIC12.26□□□□□ -0.45
Trove2O08848 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Gm16296-201ENSMUST00000159905 325 ntBASIC12.26□□□□□ -0.45
Trove2O08848 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trove2O08848 Gm44882-201ENSMUST00000205702 802 ntBASIC12.26□□□□□ -0.45
Trove2O08848 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.26□□□□□ -0.45
Trove2O08848 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.26□□□□□ -0.45
Trove2O08848 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trove2O08848 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Trove2O08848 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trove2O08848 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trove2O08848 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trove2O08848 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trove2O08848 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trove2O08848 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trove2O08848 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trove2O08848 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trove2O08848 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.25□□□□□ -0.45
Trove2O08848 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trove2O08848 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trove2O08848 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trove2O08848 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.25□□□□□ -0.45
Trove2O08848 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trove2O08848 Gm13226-201ENSMUST00000117838 404 ntBASIC12.25□□□□□ -0.45
Trove2O08848 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.25□□□□□ -0.45
Trove2O08848 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trove2O08848 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trove2O08848 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trove2O08848 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.25□□□□□ -0.45
Trove2O08848 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.25□□□□□ -0.45
Trove2O08848 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.25□□□□□ -0.45
Trove2O08848 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trove2O08848 Gm18584-201ENSMUST00000203098 964 ntBASIC12.25□□□□□ -0.45
Trove2O08848 Gm5904-201ENSMUST00000210286 865 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms