Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Gm24891-201ENSMUST00000104391 136 ntBASIC12.43□□□□□ -0.42
Ebf3O08791 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ebf3O08791 Gm13888-201ENSMUST00000119148 422 ntBASIC12.43□□□□□ -0.42
Ebf3O08791 Gm12029-201ENSMUST00000120073 832 ntBASIC12.43□□□□□ -0.42
Ebf3O08791 Gm14760-201ENSMUST00000121831 999 ntBASIC12.43□□□□□ -0.42
Ebf3O08791 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.43□□□□□ -0.42
Ebf3O08791 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ebf3O08791 Rprl1-201ENSMUST00000158050 327 ntBASIC12.43□□□□□ -0.42
Ebf3O08791 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ebf3O08791 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ebf3O08791 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Gm6905-201ENSMUST00000205729 511 ntBASIC12.43□□□□□ -0.42
Ebf3O08791 Gm8285-201ENSMUST00000208293 759 ntBASIC12.43□□□□□ -0.42
Ebf3O08791 Gm4157-201ENSMUST00000211647 679 ntBASIC12.43□□□□□ -0.42
Ebf3O08791 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.43□□□□□ -0.42
Ebf3O08791 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.43□□□□□ -0.42
Ebf3O08791 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.43□□□□□ -0.42
Ebf3O08791 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ebf3O08791 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.42□□□□□ -0.42
Ebf3O08791 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ebf3O08791 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ebf3O08791 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.42□□□□□ -0.42
Ebf3O08791 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ebf3O08791 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Ebf3O08791 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Ebf3O08791 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Gm8566-201ENSMUST00000120174 465 ntBASIC12.42□□□□□ -0.42
Ebf3O08791 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.42□□□□□ -0.42
Ebf3O08791 Mir6546-201ENSMUST00000184460 62 ntBASIC12.42□□□□□ -0.42
Ebf3O08791 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Ebf3O08791 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.42□□□□□ -0.42
Ebf3O08791 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Ebf3O08791 Gm43916-201ENSMUST00000205062 967 ntBASIC12.42□□□□□ -0.42
Ebf3O08791 Gm4607-201ENSMUST00000206649 577 ntBASIC12.42□□□□□ -0.42
Ebf3O08791 Gm44551-201ENSMUST00000208804 171 ntBASIC12.42□□□□□ -0.42
Ebf3O08791 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ebf3O08791 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ebf3O08791 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ebf3O08791 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.42□□□□□ -0.42
Ebf3O08791 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.42□□□□□ -0.42
Ebf3O08791 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf3O08791 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ebf3O08791 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.41□□□□□ -0.42
Ebf3O08791 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ebf3O08791 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.41□□□□□ -0.42
Ebf3O08791 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Gm11509-201ENSMUST00000117358 325 ntBASIC12.41□□□□□ -0.42
Ebf3O08791 Gm23085-201ENSMUST00000157849 293 ntBASIC12.41□□□□□ -0.42
Ebf3O08791 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.41□□□□□ -0.42
Ebf3O08791 Gm17391-201ENSMUST00000171036 126 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms