Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Gm14644-201ENSMUST00000116671 647 ntBASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Gm26956-201ENSMUST00000182176 986 ntBASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdh9F8VPK8 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.21□□□□□ -0.46
Pcdh9F8VPK8 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh9F8VPK8 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh9F8VPK8 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.21□□□□□ -0.46
Pcdh9F8VPK8 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh9F8VPK8 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh9F8VPK8 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Pcdh9F8VPK8 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Pcdh9F8VPK8 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh9F8VPK8 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Gm11700-201ENSMUST00000119409 403 ntBASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Mir1938-201ENSMUST00000158746 100 ntBASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Gm2991-201ENSMUST00000173338 480 ntBASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Gm9230-201ENSMUST00000188228 532 ntBASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Gm6334-201ENSMUST00000207083 228 ntBASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Gm8712-201ENSMUST00000221090 701 ntBASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh9F8VPK8 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Gm12015-201ENSMUST00000117065 843 ntBASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Gm11989-201ENSMUST00000117240 672 ntBASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Gm11362-201ENSMUST00000118838 850 ntBASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Gm11222-201ENSMUST00000119005 738 ntBASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh9F8VPK8 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms