Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Pea15b-202ENSMUST00000183185 555 ntBASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Gm44236-201ENSMUST00000204492 513 ntBASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Gm15539-201ENSMUST00000118452 566 ntBASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Gm13002-201ENSMUST00000119286 682 ntBASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Gm14153-201ENSMUST00000119923 1139 ntBASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a3E9PWQ3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Gm12424-201ENSMUST00000179673 447 ntBASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Gm42467-201ENSMUST00000202954 1447 ntBASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.52□□□□□ -0.56
Col6a3E9PWQ3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm9574-201ENSMUST00000173127 845 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm6317-201ENSMUST00000183159 1000 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm45258-201ENSMUST00000210042 853 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm18859-201ENSMUST00000118792 825 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm7456-201ENSMUST00000182862 1011 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms