Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm13809-201ENSMUST00000117921 597 ntBASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm28937-201ENSMUST00000185413 695 ntBASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm29400-201ENSMUST00000187208 695 ntBASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm28662-201ENSMUST00000188446 695 ntBASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm28251-201ENSMUST00000188835 695 ntBASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm37835-201ENSMUST00000193305 361 ntBASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm37318-201ENSMUST00000194325 695 ntBASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm38017-201ENSMUST00000194768 695 ntBASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm37287-201ENSMUST00000195449 695 ntBASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm37793-201ENSMUST00000195548 695 ntBASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm1821-202ENSMUST00000227415 750 ntBASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clca3bE9PUL3 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Gm9062-201ENSMUST00000117712 727 ntBASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Gm13263-201ENSMUST00000121271 838 ntBASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Gm18753-201ENSMUST00000201000 566 ntBASIC12.81□□□□□ -0.36
Clca3bE9PUL3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.81□□□□□ -0.36
Clca3bE9PUL3 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms