Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Mir181d-201ENSMUST00000102383 72 ntBASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Gm14165-201ENSMUST00000121456 952 ntBASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Gm9162-201ENSMUST00000182081 991 ntBASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Gm37284-201ENSMUST00000193607 539 ntBASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Ighv1-60-201ENSMUST00000195816 405 ntBASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 AC162932.1-201ENSMUST00000219209 872 ntBASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hfm1D3Z4R1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Gm14132-201ENSMUST00000117188 1719 ntBASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Gm13039-201ENSMUST00000118638 794 ntBASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Gm9166-201ENSMUST00000120293 561 ntBASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 CT030135.2-201ENSMUST00000225255 893 ntBASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hfm1D3Z4R1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Gm27956-201ENSMUST00000175604 260 ntBASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Gm24954-201ENSMUST00000178831 110 ntBASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Gm45094-201ENSMUST00000207013 617 ntBASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 CT030652.1-201ENSMUST00000227377 1235 ntBASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hfm1D3Z4R1 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 AC165351.1-201ENSMUST00000219078 2020 ntBASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Gm25148-201ENSMUST00000104611 123 ntBASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Gm4982-201ENSMUST00000160440 1098 ntBASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Mir7035-201ENSMUST00000184713 82 ntBASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Gm2448-201ENSMUST00000207080 559 ntBASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms