Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Gm4310-201ENSMUST00000177847 889 ntBASIC10.71□□□□□ -0.69
Shank1D3YZU1 Mir6923-201ENSMUST00000184592 72 ntBASIC10.71□□□□□ -0.69
Shank1D3YZU1 Gm19640-201ENSMUST00000214849 464 ntBASIC10.71□□□□□ -0.69
Shank1D3YZU1 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.71□□□□□ -0.69
Shank1D3YZU1 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.71□□□□□ -0.69
Shank1D3YZU1 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.71□□□□□ -0.69
Shank1D3YZU1 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.71□□□□□ -0.69
Shank1D3YZU1 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shank1D3YZU1 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Shank1D3YZU1 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Shank1D3YZU1 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Shank1D3YZU1 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Shank1D3YZU1 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Shank1D3YZU1 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Shank1D3YZU1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
Shank1D3YZU1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.71□□□□□ -0.7
Shank1D3YZU1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Shank1D3YZU1 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Shank1D3YZU1 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.71□□□□□ -0.7
Shank1D3YZU1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Shank1D3YZU1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Shank1D3YZU1 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Shank1D3YZU1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Gm42433-201ENSMUST00000196806 940 ntBASIC10.7□□□□□ -0.7
Shank1D3YZU1 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 AC140375.1-201ENSMUST00000225421 694 ntBASIC10.7□□□□□ -0.7
Shank1D3YZU1 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.7□□□□□ -0.7
Shank1D3YZU1 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.7□□□□□ -0.7
Shank1D3YZU1 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.7□□□□□ -0.7
Shank1D3YZU1 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Shank1D3YZU1 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.7□□□□□ -0.7
Shank1D3YZU1 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shank1D3YZU1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Gm14247-201ENSMUST00000120950 237 ntBASIC10.69□□□□□ -0.7
Shank1D3YZU1 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.69□□□□□ -0.7
Shank1D3YZU1 Gm8894-201ENSMUST00000074642 666 ntBASIC10.69□□□□□ -0.7
Shank1D3YZU1 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms