Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Gm5781-201ENSMUST00000219792 443 ntBASIC9.61□□□□□ -0.87
Gm12887B1AVM1 AC155237.1-201ENSMUST00000226196 1279 ntBASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm12887B1AVM1 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Gm42693-201ENSMUST00000196779 631 ntBASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Gm7287-201ENSMUST00000205267 602 ntBASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Gm20949-201ENSMUST00000206478 952 ntBASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Gm5867-201ENSMUST00000063197 592 ntBASIC9.6□□□□□ -0.87
Gm12887B1AVM1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm12887B1AVM1 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms