Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Gm23582-201ENSMUST00000158530 139 ntBASIC9.59□□□□□ -0.87
Chd6A3KFM7 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.59□□□□□ -0.87
Chd6A3KFM7 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC9.59□□□□□ -0.87
Chd6A3KFM7 Gm18001-201ENSMUST00000212023 688 ntBASIC9.59□□□□□ -0.87
Chd6A3KFM7 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Gm5191-201ENSMUST00000222882 1236 ntBASIC9.59□□□□□ -0.87
Chd6A3KFM7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC9.59□□□□□ -0.87
Chd6A3KFM7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Chd6A3KFM7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Chd6A3KFM7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Chd6A3KFM7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Chd6A3KFM7 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Gm15033-201ENSMUST00000118188 673 ntBASIC9.58□□□□□ -0.88
Chd6A3KFM7 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Gm37365-201ENSMUST00000193109 409 ntBASIC9.58□□□□□ -0.88
Chd6A3KFM7 Gm42908-201ENSMUST00000197508 870 ntBASIC9.58□□□□□ -0.88
Chd6A3KFM7 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.58□□□□□ -0.88
Chd6A3KFM7 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Elobl-202ENSMUST00000082339 300 ntBASIC9.58□□□□□ -0.88
Chd6A3KFM7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC9.58□□□□□ -0.88
Chd6A3KFM7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Gm38346-201ENSMUST00000192379 2639 ntBASIC9.58□□□□□ -0.88
Chd6A3KFM7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Gm43045-201ENSMUST00000198725 2095 ntBASIC9.58□□□□□ -0.88
Chd6A3KFM7 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Gm25872-201ENSMUST00000177784 100 ntBASIC9.58□□□□□ -0.88
Chd6A3KFM7 Gm37218-201ENSMUST00000192917 390 ntTSL 2 BASIC9.58□□□□□ -0.88
Chd6A3KFM7 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC9.58□□□□□ -0.88
Chd6A3KFM7 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.58□□□□□ -0.88
Chd6A3KFM7 AC163646.3-201ENSMUST00000228879 772 ntBASIC9.58□□□□□ -0.88
Chd6A3KFM7 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Chd6A3KFM7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Mir6930-201ENSMUST00000183859 68 ntBASIC9.57□□□□□ -0.88
Chd6A3KFM7 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms