Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf40aQ9R1C7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Gm19187-201ENSMUST00000206781 892 ntBASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Prpf40aQ9R1C7 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Gm16107-201ENSMUST00000162523 862 ntBASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Gm38317-201ENSMUST00000195564 343 ntBASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf40aQ9R1C7 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Gm15074-201ENSMUST00000117603 936 ntBASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Gm6963-201ENSMUST00000147879 379 ntBASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf40aQ9R1C7 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms