Protein–RNA interactions for Protein: Q9QZD4

Ercc4, DNA repair endonuclease XPF, mousemouse

Predictions only

Length 917 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4Q9QZD4 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ercc4Q9QZD4 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.95□□□□□ -0.34
Ercc4Q9QZD4 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ercc4Q9QZD4 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Olfr284-202ENSMUST00000206647 966 ntBASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ercc4Q9QZD4 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Gm13392-201ENSMUST00000117708 150 ntBASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Gm7046-201ENSMUST00000221351 977 ntBASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ercc4Q9QZD4 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 Gm17420-201ENSMUST00000164753 153 ntBASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 Gm29396-201ENSMUST00000185659 716 ntBASIC12.92□□□□□ -0.34
Ercc4Q9QZD4 Gm18711-201ENSMUST00000199341 750 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms