Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp4cQ9D7F7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp4cQ9D7F7 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC14.29□□□□□ -0.12
Chmp4cQ9D7F7 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Gm43860-201ENSMUST00000201742 2705 ntBASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Gm10434-201ENSMUST00000101158 471 ntBASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Mir1247-201ENSMUST00000116706 82 ntBASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Gm27516-201ENSMUST00000184237 98 ntBASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Erich3-203ENSMUST00000189969 3460 ntBASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.28□□□□□ -0.12
Chmp4cQ9D7F7 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp4cQ9D7F7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp4cQ9D7F7 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp4cQ9D7F7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp4cQ9D7F7 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp4cQ9D7F7 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp4cQ9D7F7 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp4cQ9D7F7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp4cQ9D7F7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.27□□□□□ -0.12
Chmp4cQ9D7F7 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp4cQ9D7F7 Gm13392-201ENSMUST00000117708 150 ntBASIC14.27□□□□□ -0.13
Chmp4cQ9D7F7 Rprl1-201ENSMUST00000158050 327 ntBASIC14.27□□□□□ -0.13
Chmp4cQ9D7F7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp4cQ9D7F7 Gm37489-201ENSMUST00000191883 159 ntBASIC14.27□□□□□ -0.13
Chmp4cQ9D7F7 Olfr284-202ENSMUST00000206647 966 ntBASIC14.27□□□□□ -0.13
Chmp4cQ9D7F7 Morn2-202ENSMUST00000227729 656 ntBASIC14.27□□□□□ -0.13
Chmp4cQ9D7F7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp4cQ9D7F7 Gm15991-202ENSMUST00000212123 3565 ntBASIC14.27□□□□□ -0.13
Chmp4cQ9D7F7 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp4cQ9D7F7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp4cQ9D7F7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp4cQ9D7F7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp4cQ9D7F7 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp4cQ9D7F7 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp4cQ9D7F7 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Gm29396-201ENSMUST00000185659 716 ntBASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp4cQ9D7F7 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms