Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx56Q9D0R4 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ddx56Q9D0R4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx56Q9D0R4 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx56Q9D0R4 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx56Q9D0R4 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx56Q9D0R4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
Ddx56Q9D0R4 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx56Q9D0R4 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.58□□□□□ -0.4
Ddx56Q9D0R4 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx56Q9D0R4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx56Q9D0R4 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.58□□□□□ -0.4
Ddx56Q9D0R4 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.58□□□□□ -0.4
Ddx56Q9D0R4 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx56Q9D0R4 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx56Q9D0R4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Gm13665-201ENSMUST00000120830 528 ntBASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Gm43962-201ENSMUST00000203898 190 ntBASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Gm8956-201ENSMUST00000203939 825 ntBASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ddx56Q9D0R4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Gm25668-201ENSMUST00000157700 129 ntBASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Gm25700-201ENSMUST00000177693 110 ntBASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Gm45224-201ENSMUST00000208203 414 ntBASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx56Q9D0R4 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms