Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm12616-201ENSMUST00000118594 382 ntBASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm13045-201ENSMUST00000119019 712 ntBASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm13263-201ENSMUST00000121271 838 ntBASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm10051-201ENSMUST00000145209 414 ntBASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm12624-201ENSMUST00000177615 382 ntBASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm12621-201ENSMUST00000177760 382 ntBASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm12615-201ENSMUST00000177970 382 ntBASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm12622-201ENSMUST00000177975 382 ntBASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm12627-201ENSMUST00000178412 382 ntBASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm12625-201ENSMUST00000179122 382 ntBASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm12614-201ENSMUST00000179586 382 ntBASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm12613-201ENSMUST00000180323 382 ntBASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm9211-201ENSMUST00000182882 975 ntBASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Ginm1-202ENSMUST00000065124 300 ntBASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm7Q9CQQ8 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Gm42599-201ENSMUST00000201308 469 ntBASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lsm7Q9CQQ8 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms