Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Gm18893-201ENSMUST00000198416 943 ntBASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Gm35960-201ENSMUST00000202712 767 ntBASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Gm17812-201ENSMUST00000204935 318 ntBASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa3Q9CQ71 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Gm8956-201ENSMUST00000203939 825 ntBASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Gm4607-201ENSMUST00000206649 577 ntBASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa3Q9CQ71 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Gm22133-201ENSMUST00000102082 109 ntBASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Mir877-201ENSMUST00000104738 85 ntBASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Gm13996-201ENSMUST00000118456 430 ntBASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Gm27627-201ENSMUST00000183644 150 ntBASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms