Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap3Q99LM2 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Gm13829-201ENSMUST00000119600 138 ntBASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Gm11425-201ENSMUST00000119608 498 ntBASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Mir1982-201ENSMUST00000157368 74 ntBASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Snora78-201ENSMUST00000158630 128 ntBASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Gm38241-201ENSMUST00000192641 898 ntBASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Gm42627-201ENSMUST00000197347 224 ntBASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Gm9396-201ENSMUST00000076703 567 ntBASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.37□□□□□ -0.43
Cdk5rap3Q99LM2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Gm11531-201ENSMUST00000117614 555 ntBASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms