Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm44647-201ENSMUST00000207402 428 ntBASIC14.71□□□□□ -0.05
RtcbQ99LF4 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RtcbQ99LF4 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC14.71□□□□□ -0.05
RtcbQ99LF4 Gm19046-201ENSMUST00000221263 1298 ntBASIC14.71□□□□□ -0.05
RtcbQ99LF4 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RtcbQ99LF4 Gm7536-201ENSMUST00000077389 444 ntBASIC14.71□□□□□ -0.05
RtcbQ99LF4 Gm5453-201ENSMUST00000080866 447 ntBASIC14.71□□□□□ -0.05
RtcbQ99LF4 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RtcbQ99LF4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RtcbQ99LF4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.71□□□□□ -0.05
RtcbQ99LF4 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RtcbQ99LF4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.71□□□□□ -0.05
RtcbQ99LF4 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RtcbQ99LF4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RtcbQ99LF4 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
RtcbQ99LF4 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RtcbQ99LF4 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RtcbQ99LF4 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RtcbQ99LF4 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
RtcbQ99LF4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RtcbQ99LF4 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.7□□□□□ -0.06
RtcbQ99LF4 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Gm12274-201ENSMUST00000120062 385 ntBASIC14.7□□□□□ -0.06
RtcbQ99LF4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.7□□□□□ -0.06
RtcbQ99LF4 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Gm24248-201ENSMUST00000157321 322 ntBASIC14.7□□□□□ -0.06
RtcbQ99LF4 Gm22379-201ENSMUST00000157480 131 ntBASIC14.7□□□□□ -0.06
RtcbQ99LF4 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Gm18201-201ENSMUST00000174735 875 ntBASIC14.7□□□□□ -0.06
RtcbQ99LF4 Gm7741-201ENSMUST00000181445 989 ntBASIC14.7□□□□□ -0.06
RtcbQ99LF4 Gm9884-201ENSMUST00000194343 1222 ntBASIC14.7□□□□□ -0.06
RtcbQ99LF4 Gm42779-201ENSMUST00000198807 406 ntBASIC14.7□□□□□ -0.06
RtcbQ99LF4 Gm7504-201ENSMUST00000201449 424 ntBASIC14.7□□□□□ -0.06
RtcbQ99LF4 Gm4811-201ENSMUST00000220879 1220 ntBASIC14.7□□□□□ -0.06
RtcbQ99LF4 Gm18968-201ENSMUST00000221319 862 ntBASIC14.7□□□□□ -0.06
RtcbQ99LF4 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RtcbQ99LF4 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC14.7□□□□□ -0.06
RtcbQ99LF4 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.7□□□□□ -0.06
RtcbQ99LF4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.7□□□□□ -0.06
RtcbQ99LF4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RtcbQ99LF4 Gm11470-201ENSMUST00000118868 1475 ntBASIC14.69□□□□□ -0.06
RtcbQ99LF4 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Gm11560-201ENSMUST00000117567 948 ntBASIC14.69□□□□□ -0.06
RtcbQ99LF4 Gm12218-201ENSMUST00000117666 399 ntBASIC14.69□□□□□ -0.06
RtcbQ99LF4 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC14.69□□□□□ -0.06
RtcbQ99LF4 AC238811.4-201ENSMUST00000178019 1246 ntBASIC14.69□□□□□ -0.06
RtcbQ99LF4 AC238940.3-201ENSMUST00000178830 1246 ntBASIC14.69□□□□□ -0.06
RtcbQ99LF4 Gm19587-201ENSMUST00000191395 545 ntBASIC14.69□□□□□ -0.06
RtcbQ99LF4 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.69□□□□□ -0.06
RtcbQ99LF4 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC14.69□□□□□ -0.06
RtcbQ99LF4 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Gm10263-201ENSMUST00000085163 300 ntBASIC14.69□□□□□ -0.06
RtcbQ99LF4 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RtcbQ99LF4 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms