Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Lims1Q99JW4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lims1Q99JW4 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Lims1Q99JW4 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lims1Q99JW4 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lims1Q99JW4 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Lims1Q99JW4 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lims1Q99JW4 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.89□□□□□ -0.67
Lims1Q99JW4 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.89□□□□□ -0.67
Lims1Q99JW4 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.89□□□□□ -0.67
Lims1Q99JW4 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.89□□□□□ -0.67
Lims1Q99JW4 Gm7722-201ENSMUST00000120646 741 ntBASIC10.89□□□□□ -0.67
Lims1Q99JW4 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.89□□□□□ -0.67
Lims1Q99JW4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Gm5950-201ENSMUST00000213337 772 ntBASIC10.89□□□□□ -0.67
Lims1Q99JW4 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.89□□□□□ -0.67
Lims1Q99JW4 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.89□□□□□ -0.67
Lims1Q99JW4 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Gm7399-201ENSMUST00000032395 858 ntBASIC10.89□□□□□ -0.67
Lims1Q99JW4 Gm10254-201ENSMUST00000052888 867 ntBASIC10.89□□□□□ -0.67
Lims1Q99JW4 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.89□□□□□ -0.67
Lims1Q99JW4 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lims1Q99JW4 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Gm25214-201ENSMUST00000104573 129 ntBASIC10.88□□□□□ -0.67
Lims1Q99JW4 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Gm11531-201ENSMUST00000117614 555 ntBASIC10.88□□□□□ -0.67
Lims1Q99JW4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.88□□□□□ -0.67
Lims1Q99JW4 Gm11960-201ENSMUST00000122068 925 ntBASIC10.88□□□□□ -0.67
Lims1Q99JW4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.88□□□□□ -0.67
Lims1Q99JW4 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.88□□□□□ -0.67
Lims1Q99JW4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.88□□□□□ -0.67
Lims1Q99JW4 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.88□□□□□ -0.67
Lims1Q99JW4 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms