Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Gm11425-201ENSMUST00000119608 498 ntBASIC12.04□□□□□ -0.48
Cdk9Q99J95 Gm11964-201ENSMUST00000120982 444 ntBASIC12.04□□□□□ -0.48
Cdk9Q99J95 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Gm29649-201ENSMUST00000185649 419 ntBASIC12.04□□□□□ -0.48
Cdk9Q99J95 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Gm9396-201ENSMUST00000076703 567 ntBASIC12.04□□□□□ -0.48
Cdk9Q99J95 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cdk9Q99J95 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.04□□□□□ -0.48
Cdk9Q99J95 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.03□□□□□ -0.48
Cdk9Q99J95 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.03□□□□□ -0.48
Cdk9Q99J95 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.03□□□□□ -0.48
Cdk9Q99J95 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Gm12363-201ENSMUST00000122250 668 ntBASIC12.03□□□□□ -0.48
Cdk9Q99J95 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.03□□□□□ -0.48
Cdk9Q99J95 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.03□□□□□ -0.48
Cdk9Q99J95 Gm6007-201ENSMUST00000208170 823 ntBASIC12.03□□□□□ -0.48
Cdk9Q99J95 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.03□□□□□ -0.48
Cdk9Q99J95 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.03□□□□□ -0.48
Cdk9Q99J95 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.03□□□□□ -0.48
Cdk9Q99J95 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdk9Q99J95 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cdk9Q99J95 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.02□□□□□ -0.48
Cdk9Q99J95 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdk9Q99J95 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Cdk9Q99J95 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cdk9Q99J95 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdk9Q99J95 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdk9Q99J95 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdk9Q99J95 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdk9Q99J95 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Cdk9Q99J95 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Gm13492-201ENSMUST00000119772 665 ntBASIC12.02□□□□□ -0.49
Cdk9Q99J95 Gm24644-201ENSMUST00000157114 139 ntBASIC12.02□□□□□ -0.49
Cdk9Q99J95 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.02□□□□□ -0.49
Cdk9Q99J95 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.02□□□□□ -0.49
Cdk9Q99J95 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms