Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm34099-201ENSMUST00000211592 704 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr170-203ENSMUST00000218837 1008 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Gm9368-201ENSMUST00000219348 831 ntBASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Grk6-205ENSMUST00000224653 2976 ntBASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr170-201ENSMUST00000078603 1008 ntAPPRIS ALT1 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr582-201ENSMUST00000098212 960 ntBASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Gm13260-201ENSMUST00000117797 1264 ntBASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Gm13297-201ENSMUST00000120205 934 ntBASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Gm12825-201ENSMUST00000120249 563 ntBASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Gm11349-201ENSMUST00000122209 1116 ntBASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Gm38158-201ENSMUST00000194617 339 ntBASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Gm38092-201ENSMUST00000195600 653 ntBASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Gm7046-201ENSMUST00000221351 977 ntBASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm42683-201ENSMUST00000196136 2328 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms