Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Gm23596-201ENSMUST00000104304 132 ntBASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Gm3332-201ENSMUST00000189337 928 ntBASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Gm45574-201ENSMUST00000210921 331 ntBASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Gm18730-201ENSMUST00000218038 343 ntBASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Pcdhb22Q91XZ8 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Gm14028-201ENSMUST00000117434 479 ntBASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Gm12997-201ENSMUST00000120207 640 ntBASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Gm24990-201ENSMUST00000157406 323 ntBASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Gm807-202ENSMUST00000224929 408 ntBASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.96□□□□□ -0.17
Pcdhb22Q91XZ8 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb22Q91XZ8 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.96□□□□□ -0.18
Pcdhb22Q91XZ8 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb22Q91XZ8 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb22Q91XZ8 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.96□□□□□ -0.18
Pcdhb22Q91XZ8 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb22Q91XZ8 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Gm12857-201ENSMUST00000117678 592 ntBASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Gm17040-202ENSMUST00000170597 889 ntBASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 Gm29199-201ENSMUST00000187766 775 ntBASIC13.95□□□□□ -0.18
Pcdhb22Q91XZ8 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 123.1 ms