Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Gm14644-201ENSMUST00000116671 647 ntBASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Gm5070-201ENSMUST00000177599 862 ntBASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Gm2383-201ENSMUST00000181461 807 ntBASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Gm5363-201ENSMUST00000211927 938 ntBASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga4Q91XY4 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga4Q91XY4 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms