Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm42657-201ENSMUST00000201746 211 ntBASIC13.65□□□□□ -0.22
Trex1Q91XB0 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trex1Q91XB0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.23
Trex1Q91XB0 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Gm12795-201ENSMUST00000117594 539 ntBASIC13.64□□□□□ -0.23
Trex1Q91XB0 Gm12036-201ENSMUST00000120008 530 ntBASIC13.64□□□□□ -0.23
Trex1Q91XB0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Mir1956-201ENSMUST00000157748 65 ntBASIC13.64□□□□□ -0.23
Trex1Q91XB0 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Mir6998-201ENSMUST00000183343 64 ntBASIC13.64□□□□□ -0.23
Trex1Q91XB0 Gm9136-201ENSMUST00000193368 454 ntBASIC13.64□□□□□ -0.23
Trex1Q91XB0 Gm43852-201ENSMUST00000202098 917 ntBASIC13.64□□□□□ -0.23
Trex1Q91XB0 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Gm2875-201ENSMUST00000211333 360 ntBASIC13.64□□□□□ -0.23
Trex1Q91XB0 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.64□□□□□ -0.23
Trex1Q91XB0 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.64□□□□□ -0.23
Trex1Q91XB0 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trex1Q91XB0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trex1Q91XB0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Gm11628-201ENSMUST00000117568 171 ntBASIC13.63□□□□□ -0.23
Trex1Q91XB0 Gm14441-201ENSMUST00000121960 540 ntBASIC13.63□□□□□ -0.23
Trex1Q91XB0 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.63□□□□□ -0.23
Trex1Q91XB0 Gm25072-201ENSMUST00000175233 235 ntBASIC13.63□□□□□ -0.23
Trex1Q91XB0 Mir6958-201ENSMUST00000184207 73 ntBASIC13.63□□□□□ -0.23
Trex1Q91XB0 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.63□□□□□ -0.23
Trex1Q91XB0 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Olfr584-201ENSMUST00000098210 964 ntBASIC13.63□□□□□ -0.23
Trex1Q91XB0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.63□□□□□ -0.23
Trex1Q91XB0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trex1Q91XB0 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms