Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Gm14219-201ENSMUST00000120414 288 ntBASIC11.85□□□□□ -0.51
Vsx1Q91V10 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Gm15566-201ENSMUST00000121130 590 ntBASIC11.85□□□□□ -0.51
Vsx1Q91V10 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Gm23045-201ENSMUST00000175041 96 ntBASIC11.85□□□□□ -0.51
Vsx1Q91V10 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Gm5298-201ENSMUST00000201122 892 ntBASIC11.85□□□□□ -0.51
Vsx1Q91V10 Gm44958-201ENSMUST00000203734 736 ntBASIC11.85□□□□□ -0.51
Vsx1Q91V10 Gm44158-201ENSMUST00000203881 505 ntBASIC11.85□□□□□ -0.51
Vsx1Q91V10 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Gm9797-202ENSMUST00000218003 294 ntBASIC11.85□□□□□ -0.51
Vsx1Q91V10 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.85□□□□□ -0.51
Vsx1Q91V10 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.85□□□□□ -0.51
Vsx1Q91V10 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Vsx1Q91V10 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.85□□□□□ -0.51
Vsx1Q91V10 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.85□□□□□ -0.51
Vsx1Q91V10 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.85□□□□□ -0.51
Vsx1Q91V10 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Gm26013-201ENSMUST00000104404 119 ntBASIC11.84□□□□□ -0.51
Vsx1Q91V10 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Gm11663-201ENSMUST00000117888 290 ntBASIC11.84□□□□□ -0.51
Vsx1Q91V10 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.84□□□□□ -0.51
Vsx1Q91V10 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.84□□□□□ -0.51
Vsx1Q91V10 Gm8737-201ENSMUST00000122208 642 ntBASIC11.84□□□□□ -0.51
Vsx1Q91V10 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx1Q91V10 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.84□□□□□ -0.51
Vsx1Q91V10 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Gm17877-201ENSMUST00000192578 814 ntBASIC11.84□□□□□ -0.51
Vsx1Q91V10 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Gm6722-201ENSMUST00000221586 390 ntBASIC11.84□□□□□ -0.51
Vsx1Q91V10 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx1Q91V10 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vsx1Q91V10 Matn2-203ENSMUST00000226766 3252 ntBASIC11.84□□□□□ -0.51
Vsx1Q91V10 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Vsx1Q91V10 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.83□□□□□ -0.51
Vsx1Q91V10 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Vsx1Q91V10 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Gm13263-201ENSMUST00000121271 838 ntBASIC11.83□□□□□ -0.52
Vsx1Q91V10 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.83□□□□□ -0.52
Vsx1Q91V10 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms