Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Tram1Q91V04 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tram1Q91V04 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tram1Q91V04 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tram1Q91V04 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tram1Q91V04 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tram1Q91V04 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tram1Q91V04 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Tram1Q91V04 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Tram1Q91V04 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Tram1Q91V04 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.27□□□□□ -0.77
Tram1Q91V04 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.27□□□□□ -0.77
Tram1Q91V04 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.27□□□□□ -0.77
Tram1Q91V04 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.27□□□□□ -0.77
Tram1Q91V04 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.27□□□□□ -0.77
Tram1Q91V04 Gm43575-201ENSMUST00000196420 516 ntBASIC10.27□□□□□ -0.77
Tram1Q91V04 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.27□□□□□ -0.77
Tram1Q91V04 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.27□□□□□ -0.77
Tram1Q91V04 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.27□□□□□ -0.77
Tram1Q91V04 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.27□□□□□ -0.77
Tram1Q91V04 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.27□□□□□ -0.77
Tram1Q91V04 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.77
Tram1Q91V04 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Tram1Q91V04 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Tram1Q91V04 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.27□□□□□ -0.77
Tram1Q91V04 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tram1Q91V04 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.26□□□□□ -0.77
Tram1Q91V04 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Tram1Q91V04 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.26□□□□□ -0.77
Tram1Q91V04 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.26□□□□□ -0.77
Tram1Q91V04 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.26□□□□□ -0.77
Tram1Q91V04 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.26□□□□□ -0.77
Tram1Q91V04 Gm43002-201ENSMUST00000200310 155 ntBASIC10.26□□□□□ -0.77
Tram1Q91V04 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Tram1Q91V04 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Tram1Q91V04 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Tram1Q91V04 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Tram1Q91V04 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.26□□□□□ -0.77
Tram1Q91V04 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Tram1Q91V04 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Tram1Q91V04 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.26□□□□□ -0.77
Tram1Q91V04 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.26□□□□□ -0.77
Tram1Q91V04 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tram1Q91V04 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.26□□□□□ -0.77
Tram1Q91V04 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Tram1Q91V04 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tram1Q91V04 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tram1Q91V04 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Tram1Q91V04 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tram1Q91V04 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Tram1Q91V04 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Tram1Q91V04 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tram1Q91V04 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tram1Q91V04 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms