Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Gm18054-201ENSMUST00000207539 555 ntBASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Gm17931-201ENSMUST00000208132 634 ntBASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Gm18935-201ENSMUST00000212692 664 ntBASIC11.97□□□□□ -0.49
Vps39Q8R5L3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Gm9823-201ENSMUST00000051212 327 ntBASIC11.97□□□□□ -0.49
Vps39Q8R5L3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vps39Q8R5L3 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Gm14127-201ENSMUST00000117906 678 ntBASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Gm15547-201ENSMUST00000122152 333 ntBASIC11.96□□□□□ -0.49
Vps39Q8R5L3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Gm9230-201ENSMUST00000188228 532 ntBASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Gm30285-201ENSMUST00000214614 422 ntBASIC11.96□□□□□ -0.49
Vps39Q8R5L3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Vps39Q8R5L3 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vps39Q8R5L3 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vps39Q8R5L3 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Vps39Q8R5L3 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.96□□□□□ -0.5
Vps39Q8R5L3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Vps39Q8R5L3 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.96□□□□□ -0.5
Vps39Q8R5L3 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Vps39Q8R5L3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vps39Q8R5L3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Vps39Q8R5L3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vps39Q8R5L3 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Vps39Q8R5L3 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vps39Q8R5L3 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vps39Q8R5L3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms