Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.5□□□□□ -0.41
Vopp1Q8R1C3 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vopp1Q8R1C3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vopp1Q8R1C3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vopp1Q8R1C3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vopp1Q8R1C3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Vopp1Q8R1C3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vopp1Q8R1C3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vopp1Q8R1C3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.5□□□□□ -0.41
Vopp1Q8R1C3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vopp1Q8R1C3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vopp1Q8R1C3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vopp1Q8R1C3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vopp1Q8R1C3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vopp1Q8R1C3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vopp1Q8R1C3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Gm26134-201ENSMUST00000178484 110 ntBASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Gm18561-201ENSMUST00000206027 804 ntBASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Lect2-202ENSMUST00000225183 823 ntBASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Gm16380-201ENSMUST00000077997 478 ntBASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vopp1Q8R1C3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Gm11628-201ENSMUST00000117568 171 ntBASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Gm12218-201ENSMUST00000117666 399 ntBASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Gm12791-201ENSMUST00000120788 655 ntBASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Gm7741-201ENSMUST00000181445 989 ntBASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Gm28324-201ENSMUST00000187913 264 ntBASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.48□□□□□ -0.41
Vopp1Q8R1C3 Gm30946-201ENSMUST00000198288 724 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms