Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Gm12928-201ENSMUST00000117115 573 ntBASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Gm13369-201ENSMUST00000119442 987 ntBASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Gm2231-201ENSMUST00000125661 612 ntBASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Gm27437-201ENSMUST00000183429 107 ntBASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf4Q8K4J2 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Gm8018-201ENSMUST00000173536 789 ntBASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Gm5866-201ENSMUST00000177881 973 ntBASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf4Q8K4J2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms