Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Gm26286-201ENSMUST00000104166 134 ntBASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rtn1Q8K0T0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Gm7003-201ENSMUST00000195089 312 ntBASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Gm45186-201ENSMUST00000206874 478 ntBASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Pck2-205ENSMUST00000226352 2784 ntBASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rtn1Q8K0T0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Gm43452-201ENSMUST00000201873 991 ntBASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rtn1Q8K0T0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms