Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CroccQ8CJ40 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
CroccQ8CJ40 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CroccQ8CJ40 Gm11960-201ENSMUST00000122068 925 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
CroccQ8CJ40 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CroccQ8CJ40 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
CroccQ8CJ40 Gm29615-201ENSMUST00000185371 697 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 Gm28224-201ENSMUST00000186078 697 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 Gm29001-201ENSMUST00000186177 697 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 Gm28292-201ENSMUST00000186593 697 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 Gm28101-201ENSMUST00000187608 697 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 Gm29076-201ENSMUST00000187689 697 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 Gm28302-201ENSMUST00000187931 697 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 Gm28646-201ENSMUST00000188220 697 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 Gm28205-201ENSMUST00000189177 697 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 Gm29032-201ENSMUST00000189797 697 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 Gm28695-201ENSMUST00000190300 697 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 Gm37448-201ENSMUST00000192795 697 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 Gm45433-201ENSMUST00000209386 247 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
CroccQ8CJ40 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CroccQ8CJ40 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.42□□□□□ -0.58
CroccQ8CJ40 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
CroccQ8CJ40 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CroccQ8CJ40 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CroccQ8CJ40 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.41□□□□□ -0.58
CroccQ8CJ40 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Gm14208-201ENSMUST00000119645 678 ntBASIC11.41□□□□□ -0.58
CroccQ8CJ40 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.41□□□□□ -0.58
CroccQ8CJ40 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CroccQ8CJ40 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.4□□□□□ -0.58
CroccQ8CJ40 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Gm11439-201ENSMUST00000118598 409 ntBASIC11.4□□□□□ -0.58
CroccQ8CJ40 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Gm18734-201ENSMUST00000172937 808 ntBASIC11.4□□□□□ -0.58
CroccQ8CJ40 Gm28686-201ENSMUST00000187404 609 ntBASIC11.4□□□□□ -0.58
CroccQ8CJ40 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.4□□□□□ -0.58
CroccQ8CJ40 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.4□□□□□ -0.58
CroccQ8CJ40 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.4□□□□□ -0.58
CroccQ8CJ40 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.4□□□□□ -0.58
CroccQ8CJ40 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CroccQ8CJ40 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms