Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28bQ8CEG5 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc28bQ8CEG5 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gm23912-201ENSMUST00000104687 87 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gm11814-201ENSMUST00000119515 929 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gm12091-201ENSMUST00000146791 830 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gm6244-201ENSMUST00000178732 841 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gm8652-201ENSMUST00000181363 964 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Mir6977-201ENSMUST00000184960 64 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gm44405-201ENSMUST00000198952 126 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gm45925-201ENSMUST00000218882 744 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gm17794-201ENSMUST00000220252 955 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms