Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc17Q8CE13 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Mir7686-201ENSMUST00000200604 57 ntBASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc17Q8CE13 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Gm24231-201ENSMUST00000104315 133 ntBASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Gm7722-201ENSMUST00000120646 741 ntBASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Gm11675-201ENSMUST00000121873 832 ntBASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Gm10774-201ENSMUST00000188689 204 ntBASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.46□□□□□ -0.41
Ccdc17Q8CE13 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc17Q8CE13 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc17Q8CE13 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc17Q8CE13 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc17Q8CE13 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc17Q8CE13 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc17Q8CE13 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc17Q8CE13 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc17Q8CE13 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc17Q8CE13 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc17Q8CE13 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms