Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc38Q8CDN8 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc38Q8CDN8 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Gm12015-201ENSMUST00000117065 843 ntBASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Gm12742-201ENSMUST00000117326 410 ntBASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Gm13392-201ENSMUST00000117708 150 ntBASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Gm11222-201ENSMUST00000119005 738 ntBASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Gm17420-201ENSMUST00000164753 153 ntBASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Gm38241-201ENSMUST00000192641 898 ntBASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Gm18935-201ENSMUST00000212692 664 ntBASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc38Q8CDN8 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Gm5419-201ENSMUST00000119301 527 ntBASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Gm7722-201ENSMUST00000120646 741 ntBASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Gm27501-201ENSMUST00000183599 107 ntBASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccdc38Q8CDN8 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms